Nikodem J. Popławski, Abbas Shirinifard, Maciej Swat, and James A. Glazier,
Mathematical biosciences and engineering 5, 355-388 (2008)

Mahoney A. W., Smith B. G., Flann N. S., and Podgorski G. J.,
IEEE conference on Computational Intelligence in Bioinformatics and Bioengineering, (2008)

Nikodem J. Popławski, Maciej Swat, J. Scott Gens and James A. Glazier,
Physica A: Statistical and Theoretical Physics 373, 521-532 (2007)

H G E Hentschel, T Glimm, J A Glazier, S A Newman,
Proc Biol Sci. 271, 1713–1722 (2004)

R. Chaturvedi, C. Huang, J. A. Izaguirre, S. A. Newman, J. A. Glazier,
Lecture Notes in Computer Science 3305, 543-552 (2004)

Trevor Cickovski, Kedar Aras, Maciej Swat, Roeland M. H. Merks, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre
Computing in Science and Engineering, 9, 50-60 (2007)

Trevor M. Cickovski, Chengbang Huang, Rajiv Chaturvedi, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesus A. Izaguirre,
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2, 273-288 (2005)

R. Chaturvedi, C. Huang, B. Kazmierczak, T. Schneider, J. A. Izaguirre, T. Glimm, H. G. E. Hentschel, S. A. Newman, J. A. Glazier, M. Alber,
Journal of The Royal Society Interface 2, 237-253 (2005)

Roeland M.H. Merks, and James A. Glazier,
Physica A: Statistical Mechanics and its Applications 352, 113-130 (2005)

Kedar Aras,
Master’s Thesis, Dept. of Computer Science & Eng., Univ. of Notre Dame (2005)

J. A. Izaguirre, R. Chaturvedi, C. Huang, T. Cickovski, J. Coffland, G. Thomas, G. Forgacs, M. Alber, G. Hentschel, S. A. Newman, and J. A. Glazier,
Bioinformatics 20, 1129-1137 (2004)

Trevor M. Cickovski,
Master’s Thesis, Dept. of Computer Science & Eng., Univ. of Notre Dame (2004)